Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MshDAcetyltransferase, GNAT family; KEGG: mka:MK0549 3.2e-07 acetyltransferase K03789; COG: NOG36299 non supervised orthologous group. (451 aa)    
Predicted Functional Partners:
YcgJ
Methyltransferase domain protein; KEGG: bpm:BURPS1710b_3115 8.0e-20 methyl transferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
  
   0.783
EDS05262.1
COG: COG2315 Uncharacterized protein conserved in bacteria.
 
     0.691
EDS05267.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG3871 Uncharacterized stress protein (general stress protein 26).
 
     0.669
ydaF
Acetyltransferase, GNAT family; KEGG: bth:BT4506 9.0e-24 putative acetyltransferase K03827; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.638
EDS06036.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
 
     0.599
EDS06122.1
Hypothetical protein; COG: NOG23666 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.591
EDS05266.1
Hypothetical protein; COG: COG1893 Ketopantoate reductase.
       0.559
EDS08066.1
Hypothetical protein; COG: NOG14690 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.540
EDS06123.1
Hypothetical protein; COG: NOG19109 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.523
EDS07212.1
Hypothetical protein; COG: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
  
   
 0.514
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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