STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB77392.1Hypothetical protein; KEGG: eci:UTI89_C4210 1.4e-12 yicJ; hypothetical symporter YicJ K03292; Psort location: CytoplasmicMembrane, score: 10.00. (529 aa)    
Predicted Functional Partners:
EFB77390.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: aha:AHA_2689 7.0e-35 beta-glucosidase K01188.
 
     0.775
EFB77389.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sal:Sala_1017 3.8e-100 beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.768
EFB76855.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sal:Sala_1017 1.8e-100 beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.733
EFB77348.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: sal:Sala_1017 2.3e-109 beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.713
EFB77388.1
KEGG: tte:TTE0562 0.00072 baeS2; sensory transduction histidine kinases K07706; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.700
EFB77616.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: xcv:XCV4356 5.8e-72 bga2; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.662
EFB77363.1
KEGG: msu:MS0539 3.9e-130 alpha-glucosidases, family 31 of glycosyl hydrolases K01187; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.614
EFB77347.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 5.7e-42 yicJ; hypothetical symporter YicJ K03292; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.584
tpiA-2
KEGG: mag:amb1819 6.1e-22 triosephosphate isomerase K01803; Psort location: Cytoplasmic, score: 8.96.
 
     0.487
EFB74978.1
Hypothetical protein; KEGG: tte:TTE0562 3.0e-08 baeS2; sensory transduction histidine kinases K07706; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.486
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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