STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB77491.1KEGG: lpn:lpg0773 2.0e-60 polysaccharide ABC transporter, ATP binding protein K01990; Psort location: CytoplasmicMembrane, score: 8.02. (430 aa)    
Predicted Functional Partners:
EFB77490.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
EFB77242.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 0.980
EFB76290.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 0.980
EFB75532.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.980
EFB77492.1
Glycosyltransferase family 6; KEGG: hsa:28 5.7e-26 ABO; ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) K00707:K00709; Psort location: Cytoplasmic, score: 8.96.
     
 0.775
EFB77493.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB77489.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1387 1.1e-36 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.646
EFB77246.1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 9.5e-88 glycosyltransferase K00754.
 
 
 0.598
EFB77488.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1387 1.3e-26 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.588
EFB77486.1
Glycosyltransferase, group 2 family protein; KEGG: spi:MGAS10750_Spy0694 1.5e-14 rgpEc; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.565
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.