STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsAKEGG: ldb:Ldb1959 6.2e-100 gpsA2; glycerol-3-phosphate dehydrogenase K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (332 aa)    
Predicted Functional Partners:
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.959
plsY
Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
 
 0.954
EFB76709.1
Putative acyl-phosphate glycerol 3-phosphate acyltransferase; KEGG: mlo:mll0639 0.0079 phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 9.46; Belongs to the PlsY family.
  
 
 0.917
EFB75571.1
Acyltransferase; KEGG: chu:CHU_2690 7.0e-21 plsC; 1-acylglycerol-3-phosphate O-acyltransferase (1-acyl-sn-glycerol-3-phosphate acyltransferase) K00655.
   
 0.893
EFB76530.1
Putative undecaprenol kinase; KEGG: bsu:BG11040 3.5e-19 dgkA, dgk, yqxF; diacylglycerol kinase K00901; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.838
EFB75280.1
FAD dependent oxidoreductase; KEGG: ctc:CTC02436 1.1e-116 glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.824
EFB76576.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: eci:UTI89_C2362 1.7e-09 hypothetical protein.
     
 0.809
EFB77257.1
KEGG: sak:SAK_0393 7.8e-22 Cof-like hydrolase/peptidyl-prolyl cis-trans isomerase domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.780
cysE
KEGG: ctc:CTC00351 2.6e-62 serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.768
EFB77255.1
KEGG: bpm:BURPS1710b_1858 0.0086 Ser/Thr protein phosphatase family protein; Psort location: Cytoplasmic, score: 8.96.
       0.723
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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