STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76881.1DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 6.9e-06 dam; adenine-specific DNA methyltransferase K06223; Psort location: Cytoplasmic, score: 8.96. (124 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible domain protein CinA; KEGG: hsa:80308 1.4e-10 FLAD1; FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) K00953; Belongs to the CinA family.
    
 0.801
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
  0.784
EFB77192.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.737
EFB76880.1
KEGG: reh:H16_A1096 0.0011 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.96.
  
     0.717
EFB77321.1
KEGG: reh:H16_A1096 0.0017 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
EFB77330.1
Hypothetical protein.
  
     0.715
EFB77179.1
CHC2 zinc finger domain protein; KEGG: ilo:IL2201 4.6e-10 dnaG; DNA primase K02316; Psort location: Cytoplasmic, score: 8.96.
  
     0.688
EFB77174.1
Hypothetical protein.
  
     0.565
EFB76882.1
Hypothetical protein.
       0.554
EFB77215.1
RNA polymerase sigma factor, sigma-70 family; Psort location: Cytoplasmic, score: 8.96.
  
     0.535
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.