STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76986.1KEGG: efa:EF0246 3.2e-80 amino acid ABC transporter, ATP-binding protein K02028; Psort location: Cytoplasmic, score: 9.12. (246 aa)    
Predicted Functional Partners:
EFB76987.1
KEGG: sma:SAV6546 3.2e-23 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EFB75062.1
ABC transporter, permease protein; KEGG: atc:AGR_L_2810 1.7e-27 polar amino acid transport system permease proetin / polar amino acid transport system ATP-binding proetin K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EFB75526.1
KEGG: sma:SAV6546 2.5e-25 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.998
EFB75059.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 3.8e-22 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.977
EFB76988.1
KEGG: bur:Bcep18194_A4762 2.8e-14 ABC amino acid transporter, periplasmic ligand binding protein K01713; Psort location: Periplasmic, score: 9.44.
 
 0.957
EFB75527.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 1.4e-29 fliY; cystine-binding periplasmic protein precursor K02030:K02424; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
 0.915
EFB75374.1
KEGG: pen:PSEEN3751 1.1e-23 ABC efflux transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.914
EFB76639.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: reh:H16_A3653 3.3e-23 ABC-type transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.905
EFB77555.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 3.3e-46 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.900
EFB75897.1
KEGG: reh:H16_A0776 4.3e-92 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 9.99.
 
     
0.899
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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