STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB77065.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
EFB77064.1
Hypothetical protein.
      0.945
EFB77060.1
Hypothetical protein.
       0.524
EFB77059.1
Hypothetical protein.
       0.513
EFB77061.1
DNA topoisomerase; KEGG: efa:EF2312 1.2e-137 topB-2; DNA topoisomerase III K03169; Psort location: Cytoplasmic, score: 8.96.
       0.513
EFB77062.1
Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.513
EFB77063.1
Hypothetical protein.
       0.513
EFB77057.1
KEGG: fra:Francci3_2345 6.7e-55 DNA methylase N-4/N-6 K00590; Belongs to the N(4)/N(6)-methyltransferase family.
       0.486
EFB77058.1
NlpC/P60 family protein; KEGG: sfl:SF1683 2.0e-18 ydhO; putative lipoprotein K01183.
       0.486
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.