STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB77145.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (167 aa)    
Predicted Functional Partners:
EFB77562.1
Phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_1056 6.1e-93 PTS system, beta-glucoside-specific, IIABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.821
EFB75520.1
Phosphotransferase system, EIIC; KEGG: bha:BH0595 1.8e-109 bglP; PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.821
EFB74847.1
Phosphotransferase system, EIIB; KEGG: lpl:lp_0905 1.7e-74 pts12BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.821
EFB74509.1
Phosphotransferase system, EIIC; KEGG: lwe:lwe0269 1.5e-91 PTS system, beta-glucoside-specific IIABC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.821
EFB74407.1
PTS system, glucose-like IIB component; KEGG: gka:GK0991 1.0e-153 PTS system, glucose-specific enzyme II, A component K02763:K02764:K02765; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.821
EFB77146.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 2.7e-67 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.664
EFB77147.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 4.3e-76 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.649
EFB77144.1
Efflux ABC transporter, permease protein; KEGG: mpe:MYPE6470 9.5e-08 parC; DNA topoisomerase IV subunit A K02621; Psort location: OuterMembrane, score: 8.97.
 
     0.532
EFB77148.1
Hypothetical protein.
       0.488
EFB76017.1
KEGG: bcl:ABC3764 2.6e-149 PTS system, trehalose-specific enzyme II, BC component K02808:K02809:K02810; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.471
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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