STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76845.1GDSL-like protein; KEGG: reh:H16_B2513 2.0e-32 lysophospholipase L1 or related esterase. (374 aa)    
Predicted Functional Partners:
EFB76846.1
Polysaccharide deacetylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.814
EFB76844.1
Glycosyl hydrolase, family 43; KEGG: pat:Patl_3728 5.9e-08 alpha-L-arabinofuranosidase K01209; Belongs to the glycosyl hydrolase 43 family.
 
    0.799
EFB76847.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: cpf:CPF_1474 4.6e-73 lacZ; beta-galactosidase K01190; Belongs to the glycosyl hydrolase 2 family.
 
     0.791
EFB74805.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
   0.741
EFB75497.1
Polygalacturonase (pectinase); KEGG: tma:TM0437 4.5e-33 exo-poly-alpha-D-galacturonosidase, putative K01238; Psort location: Extracellular, score: 9.45; Belongs to the glycosyl hydrolase 28 family.
 
  0.706
EFB77399.1
Hypothetical protein; KEGG: cal:orf19.4072 1.1e-06 HYR10; similar to cell surface flocculin K01186; Psort location: Extracellular, score: 9.64.
   
 0.623
EFB75421.1
Fibronectin type III domain protein; KEGG: dme:Dmel_CG10443 9.4e-06 Lar; Leukocyte-antigen-related-like K01104.
   
 0.623
EFB74677.1
Hypothetical protein.
   
 0.623
EFB76843.1
KEGG: btl:BALH_3368 4.3e-10 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 8.96.
       0.543
EFB74679.1
Hypothetical protein.
  
   0.529
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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