EFB76470.1 protein (Subdoligranulum variabile)

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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Score

EFB76470.1

Hypothetical protein. (202 aa)

Predicted Functional Partners:

repA

0.872

EFB76468.1

0.851

EFB76472.1

0.826

EFB76466.1

0.798

EFB76861.1

0.786

EFB76888.1

0.629

EFB76891.1

0.508

EFB76890.1

0.477

EFB76242.1

0.467

EFB77185.1

0.462

Your Current Organism:

Subdoligranulum variabile

NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFB76242.1	EFB76470.1	SUBVAR_06028	SUBVAR_04838	Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.	Hypothetical protein.	0.467
EFB76466.1	EFB76468.1	SUBVAR_04834	SUBVAR_04836	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	0.859
EFB76466.1	EFB76470.1	SUBVAR_04834	SUBVAR_04838	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	Hypothetical protein.	0.798
EFB76466.1	EFB76472.1	SUBVAR_04834	SUBVAR_04840	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	DNA-binding helix-turn-helix protein.	0.771
EFB76466.1	EFB76861.1	SUBVAR_04834	SUBVAR_04786	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	Plasmid recombination enzyme.	0.746
EFB76466.1	repA	SUBVAR_04834	SUBVAR_04837	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	Replication initiator protein A domain protein; Psort location: Cytoplasmic, score: 8.96.	0.773
EFB76468.1	EFB76466.1	SUBVAR_04836	SUBVAR_04834	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	0.859
EFB76468.1	EFB76470.1	SUBVAR_04836	SUBVAR_04838	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	Hypothetical protein.	0.851
EFB76468.1	EFB76472.1	SUBVAR_04836	SUBVAR_04840	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	DNA-binding helix-turn-helix protein.	0.798
EFB76468.1	repA	SUBVAR_04836	SUBVAR_04837	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	Replication initiator protein A domain protein; Psort location: Cytoplasmic, score: 8.96.	0.860
EFB76470.1	EFB76242.1	SUBVAR_04838	SUBVAR_06028	Hypothetical protein.	Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.	0.467
EFB76470.1	EFB76466.1	SUBVAR_04838	SUBVAR_04834	Hypothetical protein.	Resolvase, N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.	0.798
EFB76470.1	EFB76468.1	SUBVAR_04838	SUBVAR_04836	Hypothetical protein.	Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.96.	0.851
EFB76470.1	EFB76472.1	SUBVAR_04838	SUBVAR_04840	Hypothetical protein.	DNA-binding helix-turn-helix protein.	0.826
EFB76470.1	EFB76861.1	SUBVAR_04838	SUBVAR_04786	Hypothetical protein.	Plasmid recombination enzyme.	0.786
EFB76470.1	EFB76888.1	SUBVAR_04838	SUBVAR_04509	Hypothetical protein.	Hypothetical protein; KEGG: rde:RD1_A0111 6.1e-06 virD1; VirD1.	0.629
EFB76470.1	EFB76890.1	SUBVAR_04838	SUBVAR_04511	Hypothetical protein.	Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.	0.477
EFB76470.1	EFB76891.1	SUBVAR_04838	SUBVAR_04512	Hypothetical protein.	Sigma-70, region 4; Psort location: Cytoplasmic, score: 8.96.	0.508
EFB76470.1	EFB77185.1	SUBVAR_04838	SUBVAR_04345	Hypothetical protein.	Hypothetical protein.	0.462
EFB76470.1	repA	SUBVAR_04838	SUBVAR_04837	Hypothetical protein.	Replication initiator protein A domain protein; Psort location: Cytoplasmic, score: 8.96.	0.872