STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76494.1Hypothetical protein. (322 aa)    
Predicted Functional Partners:
EFB76492.1
Membrane protein; KEGG: ctc:CTC02330 0.0014 putative V-type sodium ATP synthase subunit K K02124; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.954
EFB76490.1
Transcriptional regulator, GntR family; KEGG: reh:H16_A3019 0.00097 hutC; histidine utilization repressor.
 
     0.830
EFB76491.1
Arylsulfatase; KEGG: pmu:PM1682 1.4e-173 putative sulfatase; Psort location: Cytoplasmic, score: 8.96.
 
     0.829
EFB75146.1
Hypothetical protein; KEGG: bxe:Bxe_A0223 0.00025 putative HsdS protein K01152.
  
     0.589
EFB76493.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.570
EFB76495.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.518
EFB74268.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.451
EFB75799.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.425
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.