STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76503.1Flavin reductase; KEGG: hma:rrnAC0982 0.00027 ssuE1; NADPH-dependent FMN reductase K00299. (180 aa)    
Predicted Functional Partners:
EFB76504.1
Hypothetical protein.
 
     0.859
EFB76501.1
Hypothetical protein; KEGG: eci:UTI89_C1599 4.5e-33 hypothetical protein YcjY.
 
    0.831
EFB76502.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.821
EFB76500.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.774
EFB76499.1
KEGG: shn:Shewana3_3435 6.3e-20 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
 
     0.657
EFB76283.1
Flavin reductase; KEGG: fra:Francci3_3454 0.00044 NADPH-dependent FMN reductase K00299.
 
     0.624
EFB75733.1
Oxidoreductase.
 
     0.433
EFB76771.1
Conserved hypothetical protein TIGR03905.
  
     0.426
EFB75587.1
4Fe-4S binding domain protein; KEGG: mma:MM3264 1.3e-08 coenzyme F420 hydrogenase beta subunit K00439; Psort location: Cytoplasmic, score: 8.96.
 
     0.407
EFB76021.1
Metallo-beta-lactamase domain protein; KEGG: syn:sll0550 1.9e-41 flavoprotein; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.406
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.