STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76540.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (119 aa)    
Predicted Functional Partners:
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP).
       0.732
EFB76542.1
Hypothetical protein.
       0.693
EFB76554.1
ComEC/Rec2-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.663
EFB76530.1
Putative undecaprenol kinase; KEGG: bsu:BG11040 3.5e-19 dgkA, dgk, yqxF; diacylglycerol kinase K00901; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.648
cinA
Competence/damage-inducible domain protein CinA; KEGG: hsa:80308 1.4e-10 FLAD1; FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) K00953; Belongs to the CinA family.
     
 0.567
EFB75571.1
Acyltransferase; KEGG: chu:CHU_2690 7.0e-21 plsC; 1-acylglycerol-3-phosphate O-acyltransferase (1-acyl-sn-glycerol-3-phosphate acyltransferase) K00655.
    
  0.545
EFB76719.1
KEGG: chu:CHU_3495 1.1e-10 purF; amidophosphoribosyltransferase K00764; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.537
EFB77024.1
KEGG: shn:Shewana3_3590 6.7e-16 single-strand binding protein K00655.
  
  
 0.495
EFB76050.1
KEGG: shn:Shewana3_3590 7.7e-18 single-strand binding protein K00655.
  
  
 0.495
EFB76539.1
Sporulation protein, YlmC/YmxH family; Psort location: Cytoplasmic, score: 8.96.
       0.493
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.