STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76666.1Glycosyltransferase, group 2 family protein; KEGG: lsl:LSL_0696 2.5e-23 rfaG; glycosyltransferase K00754. (337 aa)    
Predicted Functional Partners:
EFB76664.1
Rhamnan synthesis protein F; KEGG: spi:MGAS10750_Spy0695 3.2e-48 rgpFc; alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K00754.
  
  
 0.773
EFB76665.1
NAD dependent epimerase/dehydratase family protein; KEGG: sat:SYN_02652 7.2e-19 CDP-4-dehydro-6-deoxy-D-gulose 4-reductase K00100.
  
    0.765
EFB76663.1
Hypothetical protein; KEGG: spj:MGAS2096_Spy0673 1.5e-19 rgpFc; alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K00754.
  
    0.759
EFB77486.1
Glycosyltransferase, group 2 family protein; KEGG: spi:MGAS10750_Spy0694 1.5e-14 rgpEc; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
     0.758
EFB76669.1
Hypothetical protein; KEGG: lpl:lp_1180 1.3e-53 cps1D; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
  
    0.730
EFB76667.1
HAD hydrolase, family IA, variant 1.
  
    0.729
EFB76668.1
Glycosyltransferase, group 2 family protein; KEGG: mth:MTH343 1.6e-30 rhamnosyl transferase K00754.
  
    0.727
EFB75180.1
Glycosyltransferase, group 2 family protein; KEGG: mma:MM0653 5.3e-23 glycosyltransferase involved in cell wall biogenesis.
 
    
0.695
EFB76662.1
Hypothetical protein; KEGG: bxe:Bxe_C1379 0.00097 putative acyltransferase transmembrane protein K00680; Psort location: CytoplasmicMembrane, score: 10.00.
       0.580
EFB77481.1
KEGG: hne:HNE_0805 3.6e-24 glycosyl transferase, group 2 family protein K00754.
 
    0.534
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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