STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76822.1Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (269 aa)    
Predicted Functional Partners:
hpt
KEGG: tte:TTE2394 1.0e-58 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.97; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.931
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 
 0.931
deoD
KEGG: ftl:FTL_1461 3.5e-58 purine nucleoside phosphorylase K03784.
    
 0.927
EFB76553.1
KEGG: fnu:FN2073 7.3e-42 adenine phosphoribosyltransferase K00759; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.922
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
 
 0.922
pyn
KEGG: gka:GK2312 2.8e-120 pyrimidine-nucleoside phosphorylase (PYNP) K00756.
 
  
 0.891
EFB75427.1
KEGG: cac:CAC0282 1.3e-97 cytosine/guanine deaminase related protein K01487; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.884
EFB74757.1
Hypothetical protein; KEGG: bur:Bcep18194_A4171 2.5e-06 alpha/beta hydrolase K01054.
  
 
 0.882
EFB75451.1
Hypothetical protein; KEGG: ctc:CTC02272 7.2e-19 purine nucleoside phosphorylase K00755.
      0.877
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
 0.870
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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