STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76825.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: gka:GK1432 2.4e-137 glutamate synthasesmall subunit K00266; Psort location: Cytoplasmic, score: 9.97. (490 aa)    
Predicted Functional Partners:
EFB76824.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268.
 0.999
EFB77421.1
Oxidoreductase NAD-binding domain protein; KEGG: rde:RD1_0005 6.5e-25 vanB; vanillate O-demethylase oxidoreductase, putative K00492; Psort location: Cytoplasmic, score: 8.96.
   
 0.981
EFB75072.1
Oxidoreductase NAD-binding domain protein; KEGG: cno:NT01CX_0467 1.8e-70 glutamate synthase, small subunit K00226; Psort location: Cytoplasmic, score: 9.97.
 
 0.980
EFB77456.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: cno:NT01CX_0097 7.9e-171 NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.26; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.935
nifJ
Pyruvate synthase; KEGG: ctc:CTC01741 3.5e-296 pyruvate-flavodoxin oxidoreductase K03737.
 
 
 0.913
EFB74583.1
Hypothetical protein; KEGG: ctc:CTC01741 1.0e-113 pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.913
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
 0.907
EFB75893.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.6e-85 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.97.
 
  
0.867
EFB75933.1
KEGG: cno:NT01CX_0392 1.5e-48 dihydroorotate dehydrogenase electron transfer subunit K00226; Psort location: Cytoplasmic, score: 9.26.
 
 0.866
EFB74781.1
Glutamine synthetase, beta-grasp domain protein; KEGG: mta:Moth_1294 2.1e-99 glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.858
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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