STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76304.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: gme:Gmet_2694 5.7e-37 PAS/PAC sensor signal transduction histidine kinase K07636; Psort location: CytoplasmicMembrane, score: 9.82. (471 aa)    
Predicted Functional Partners:
EFB76303.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 1.1e-31 phoB; positive response regulator for pho regulon K07657; Psort location: Cytoplasmic, score: 9.97.
  0.976
EFB75563.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 1.5e-43 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  0.911
EFB75448.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 9.0e-44 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  0.909
EFB77590.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 3.1e-34 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  0.901
EFB77449.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 2.7e-35 two component transcriptional regulator, winged helix family K07659; Psort location: Cytoplasmic, score: 9.97.
  0.901
EFB74423.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0420 1.3e-42 phoB; positive response regulator for pho regulon K07657; Psort location: Cytoplasmic, score: 9.97.
  0.899
EFB76198.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.1e-42 response regulator in two-component regulatory system; Psort location: Cytoplasmic, score: 9.97.
  0.898
EFB75974.1
KEGG: rha:RHA1_ro05622 4.9e-36 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
  0.888
EFB77199.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 4.1e-32 two component transcriptional regulator, winged helix family; Psort location: Cytoplasmic, score: 9.97.
  0.875
EFB75738.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 1.0e-35 response regulator in two-component regulatory system; Psort location: Cytoplasmic, score: 9.97.
  0.873
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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