STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpSHolo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (129 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.962
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.962
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
    
 0.814
EFB75923.1
Hypothetical protein; KEGG: spo:SPAC4H3.09 0.0013 putative acyl carrier protein, mitochondrial precursor K03955.
  
 
 0.790
EFB75436.1
Hypothetical protein; KEGG: sam:MW0816 6.8e-07 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.790
EFB74591.1
KEGG: hpa:HPAG1_0538 2.6e-07 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.790
EFB76347.1
Nitroreductase family protein; KEGG: fnu:FN1223 1.3e-37 oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase K00357.
       0.774
EFB76345.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EFB76344.1
Toxin-antitoxin system, toxin component, MazF family; Toxic component of a type II toxin-antitoxin (TA) system.
     
 0.681
EFB76348.1
tRNA nucleotidyltransferase/poly(A) polymerase family protein; KEGG: ctc:CTC01205 1.6e-76 tRNA nucleotidyltransferase (CCA-adding enzyme) K00974; Psort location: Cytoplasmic, score: 8.96.
       0.647
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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