STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75764.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
EFB75765.1
Hypothetical protein.
       0.685
EFB75766.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
       0.685
EFB75767.1
KEGG: noc:Noc_2142 2.3e-52 ABC transporter, ATPase subunit; Psort location: Cytoplasmic, score: 9.12.
       0.679
EFB75762.1
Glycosyltransferase, group 1 family protein; KEGG: reh:H16_A1860 1.2e-32 glycosyltransferase group 1 K00754; Psort location: Cytoplasmic, score: 8.96.
       0.520
EFB75763.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: fal:FRAAL0882 8.1e-59 putative beta-N-acetylglucosaminidase precursor K01207; Psort location: Cytoplasmic, score: 9.26.
       0.520
EFB75768.1
Bacterial transferase hexapeptide repeat protein; KEGG: ana:all1011 3.4e-44 maltose transacetylase K00661; Psort location: Cytoplasmic, score: 9.97.
       0.435
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.