STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75783.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (167 aa)    
Predicted Functional Partners:
EFB75784.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
      0.975
EFB76951.1
Chorismate mutase; KEGG: mxa:MXAN_3221 2.3e-45 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.802
EFB75723.1
KEGG: ctc:CTC01806 7.8e-196 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.792
EFB77331.1
Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.4072 5.0e-05 HYR10; similar to cell surface flocculin K01186; Psort location: OuterMembrane, score: 9.49; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.420
EFB76507.1
Hypothetical protein.
  
 
 0.420
sdaAA
KEGG: tde:TDE1506 5.4e-85 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752.
   
 
  0.408
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.