STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75809.1O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; KEGG: bfr:BF3545 3.9e-169 O-acetylhomoserine (thiol)-lyase K01740; Psort location: Cytoplasmic, score: 9.26. (428 aa)    
Predicted Functional Partners:
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.993
EFB74852.1
Methionine synthase, vitamin-B12 independent; KEGG: lsl:LSL_0129 4.6e-95 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.934
EFB75723.1
KEGG: ctc:CTC01806 7.8e-196 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.919
cysK
Cysteine synthase A; KEGG: bfs:BF4362 6.3e-107 cysK; putative cysteine synthase K01738; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.890
EFB75917.1
KEGG: mta:Moth_1307 9.3e-77 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.871
cysE
KEGG: ctc:CTC00351 2.6e-62 serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
    
 0.854
EFB77386.1
Aminotransferase, class I/II; KEGG: blo:BL1776 2.0e-172 probable aminotransferase K00842.
   
 0.847
luxS
S-ribosylhomocysteinase LuxS; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
     
 0.820
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
    
  0.819
ilvA
KEGG: chy:CHY_2459 4.7e-102 ilvA2; threonine dehydratase K01754; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.818
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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