STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75897.1KEGG: reh:H16_A0776 4.3e-92 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 9.99. (584 aa)    
Predicted Functional Partners:
potA
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.900
EFB76986.1
KEGG: efa:EF0246 3.2e-80 amino acid ABC transporter, ATP-binding protein K02028; Psort location: Cytoplasmic, score: 9.12.
 
     
0.899
EFB75525.1
ABC transporter, ATP-binding protein; KEGG: cje:Cj0902 2.0e-78 glnQ; glutamine transport system ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.899
EFB77201.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 1.3e-51 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
     
0.881
EFB77328.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 8.2e-50 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
     
0.866
EFB75896.1
KEGG: fal:FRAAL1741 5.8e-64 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.832
EFB77324.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL2864 4.5e-49 putative transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) (partial match); Psort location: CytoplasmicMembrane, score: 9.82.
 
     
0.798
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.700
EFB75058.1
KEGG: ppu:PP_0225 3.6e-63 cysteine ABC transporter, ATP-binding protein, putative K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.647
asnA
Aspartate--ammonia ligase; KEGG: cno:NT01CX_1288 4.1e-103 asnA; aspartate--ammonia ligase K01914; Psort location: Cytoplasmic, score: 9.97.
       0.634
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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