STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75912.1Peptidase M16 inactive domain protein; KEGG: bcz:BCZK3546 5.9e-63 insulysin, peptidase family M16 (insulinase) K01408; Psort location: Cytoplasmic, score: 8.96. (428 aa)    
Predicted Functional Partners:
EFB75913.1
Peptidase M16 inactive domain protein; KEGG: lwe:lwe1408 9.7e-31 zinc metallopeptidase, putative K01423.
 
  
 0.983
EFB75893.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: cte:CT0282 1.6e-85 glutamate synthase (NADPH) small chain K00266; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.982
EFB75400.1
4Fe-4S binding domain protein; KEGG: tte:TTE0128 8.0e-20 nuoI; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K00338.
  
 
 0.982
EFB75402.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: sil:SPO2784 0.00056 nuoC; NADH-quinone oxidoreductase, C subunit K00332.
   
 
 0.970
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 
 0.859
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.780
EFB75923.1
Hypothetical protein; KEGG: spo:SPAC4H3.09 0.0013 putative acyl carrier protein, mitochondrial precursor K03955.
   
 
 0.780
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.780
EFB75436.1
Hypothetical protein; KEGG: sam:MW0816 6.8e-07 dltC; D-alanyl carrier protein K03367; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.780
EFB74591.1
KEGG: hpa:HPAG1_0538 2.6e-07 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.780
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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