STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75915.1Aspartate kinase, monofunctional class; KEGG: mta:Moth_1304 7.0e-108 aspartate kinase K00928; Belongs to the aspartokinase family. (401 aa)    
Predicted Functional Partners:
EFB75917.1
KEGG: mta:Moth_1307 9.3e-77 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 8.96.
 0.988
asd
KEGG: cac:CAC0022 3.7e-125 asd; aspartate-semialdehyde dehydrogenase K00133; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.984
EFB76707.1
KEGG: spr:spr1792 7.3e-145 lysA; diaminopimelate decarboxylase K01586; Psort location: Cytoplasmic, score: 8.96.
   
 0.958
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 0.939
EFB75723.1
KEGG: ctc:CTC01806 7.8e-196 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.904
ilvA
KEGG: chy:CHY_2459 4.7e-102 ilvA2; threonine dehydratase K01754; Psort location: Cytoplasmic, score: 8.96.
  
 0.883
argG
KEGG: cpe:CPE0691 7.5e-143 argG; argininosuccinate synthase K01940; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.846
asnB
Asparagine synthase (glutamine-hydrolyzing); KEGG: lla:L00396 8.2e-169 asnB; asparagine synthetase B K01953; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.827
asnB-4
KEGG: mta:Moth_1299 6.8e-165 asparagine synthase, glutamine-hydrolyzing K01953.
  
 
 0.827
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
  0.826
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.