STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75921.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
EFB75920.1
Transglycosylase; KEGG: tte:TTE0314 5.3e-62 mrcA; Membrane carboxypeptidase (penicillin-binding protein) K05366.
       0.618
EFB75922.1
Hypothetical protein.
       0.567
EFB75919.1
Hypothetical protein.
       0.502
EFB75918.1
ACT domain protein; KEGG: cpe:CPE1414 7.0e-21 pheB; chorismate mutase K06209; Psort location: Cytoplasmic, score: 8.96.
       0.423
EFB75923.1
Hypothetical protein; KEGG: spo:SPAC4H3.09 0.0013 putative acyl carrier protein, mitochondrial precursor K03955.
       0.400
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.