STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75954.1Hypothetical protein; KEGG: cac:CAC2787 0.00015 serine/threonine protein phosphatase K07313. (113 aa)    
Predicted Functional Partners:
EFB74757.1
Hypothetical protein; KEGG: bur:Bcep18194_A4171 2.5e-06 alpha/beta hydrolase K01054.
  
 
 0.861
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.818
EFB75345.1
FHA domain protein.
    
  0.804
EFB75952.1
Hypothetical protein.
       0.773
EFB74474.1
DnaJ domain protein; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.737
EFB75951.1
Hypothetical protein.
       0.705
EFB75953.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.572
EFB75453.1
Diguanylate cyclase (GGDEF) domain protein.
  
 
 0.431
gpsA
KEGG: ldb:Ldb1959 6.2e-100 gpsA2; glycerol-3-phosphate dehydrogenase K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.423
EFB76576.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: eci:UTI89_C2362 1.7e-09 hypothetical protein.
    
  0.416
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.