STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75955.1Relaxase/mobilization nuclease domain protein. (207 aa)    
Predicted Functional Partners:
EFB74628.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.778
EFB75956.1
Hypothetical protein; KEGG: rpb:RPB_1971 0.0054 arsenate reductase K00537.
       0.773
EFB74627.1
Hypothetical protein.
 
     0.771
EFB74639.1
Toprim domain protein.
 
    0.763
EFB74626.1
Hypothetical protein.
 
     0.756
EFB74624.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.723
EFB74635.1
N-6 DNA Methylase; KEGG: chu:CHU_1468 5.5e-06 dpn; possible adenine-specific DNA methylase K00599; Psort location: Cytoplasmic, score: 8.96.
 
     0.694
EFB74315.1
DEAD/DEAH box helicase; KEGG: chu:CHU_1468 3.5e-09 dpn; possible adenine-specific DNA methylase K00599.
 
     0.676
EFB74306.1
Hypothetical protein.
 
    0.664
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.657
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.