STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76055.1CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: fal:FRAAL2247 3.2e-32 chromosome partitioning protein (partial match) K08253. (275 aa)    
Predicted Functional Partners:
spo0J
Stage 0 sporulation protein J; KEGG: pub:SAR11_0354 1.2e-41 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.96; Belongs to the ParB family.
 
 0.943
EFB74577.1
ParB-like protein; KEGG: pub:SAR11_0354 1.4e-22 parB; chromosome partitioning protein K03497; Belongs to the ParB family.
   0.873
EFB74300.1
ParB-like protein; KEGG: pub:SAR11_0354 6.5e-11 parB; chromosome partitioning protein K03497; Belongs to the ParB family.
 
   0.828
EFB76058.1
ParB-like protein; KEGG: nwi:Nwi_0254 0.00045 helix-turn-helix, fis-type K00986; Psort location: Cytoplasmic, score: 8.96.
  
   0.790
EFB76054.1
DnaB-like helicase C-terminal domain protein; KEGG: oih:OB3460 2.2e-31 dnaC; replicative DNA helicase K02314; Psort location: Cytoplasmic, score: 8.96.
     
 0.738
EFB76053.1
Hypothetical protein.
       0.727
EFB77275.1
ParB-like protein; KEGG: pub:SAR11_0354 6.5e-10 parB; chromosome partitioning protein K03497; Belongs to the ParB family.
   0.595
EFB75123.1
ParB-like protein; KEGG: pub:SAR11_0354 3.7e-10 parB; chromosome partitioning protein K03497; Belongs to the ParB family.
   0.594
EFB76900.1
ParB-like protein; KEGG: pub:SAR11_0354 2.2e-09 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 8.96; Belongs to the ParB family.
   0.583
EFB76056.1
Hypothetical protein.
       0.581
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.