STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76075.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EFB76074.1
Phage tail tape measure protein, TP901 family; KEGG: lla:L145238 0.0026 yleD; sucrose-specific PTS system IIBC component K02809:K02810; Psort location: CytoplasmicMembrane, score: 9.46.
       0.787
EFB76076.1
Hypothetical protein.
       0.779
EFB76077.1
Hypothetical protein.
       0.773
EFB76078.1
Hypothetical protein.
       0.773
EFB76079.1
Hypothetical protein.
       0.762
EFB76080.1
Hypothetical protein.
       0.762
EFB76081.1
Peptidase, M23 family; KEGG: eci:UTI89_C3250 0.0060 ygeR; hypothetical lipoprotein YgeR precursor.
       0.762
EFB76082.1
Toxin secretion/phage lysis holin; Psort location: CytoplasmicMembrane, score: 9.46.
       0.762
EFB76073.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.746
EFB76072.1
Hypothetical protein.
       0.640
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.