STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB76204.1Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1559 9.6e-24 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96. (371 aa)    
Predicted Functional Partners:
EFB76205.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 1.1e-24 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
    0.859
EFB76207.1
KEGG: sru:SRU_0281 8.1e-13 glycosyl transferase, group 1 family protein K00754.
 
     0.849
EFB76208.1
Glycosyltransferase, group 2 family protein; KEGG: spn:SP_1365 2.6e-21 glycosyl transferase, family 2 K00745.
 
    0.808
EFB76210.1
Glycosyltransferase, group 2 family protein; KEGG: fth:FTH_1387 1.4e-31 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
    0.789
EFB76209.1
Glycosyltransferase, group 2 family protein; KEGG: bce:BC5267 6.0e-31 glycosyltransferase K00754; overlaps another CDS with the same product name.
 
    0.776
EFB76202.1
Hypothetical protein.
       0.773
EFB76203.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family; KEGG: gbe:GbCGDNIH1_1622 4.1e-23 polyphosphate kinase K00937; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB76206.1
Hypothetical protein.
       0.773
EFB76211.1
Glycosyltransferase, group 1 family protein; KEGG: lsl:LSL_1556 1.8e-36 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
 
     0.746
EFB76212.1
Glycosyltransferase, group 2 family protein; KEGG: spn:SP_1365 1.0e-17 glycosyl transferase, family 2 K00745; Psort location: Cytoplasmic, score: 8.96.
 
    0.712
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.