STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75466.1Hypothetical protein; KEGG: reh:H16_A2653 7.6e-15 G:T/U mismatch-specific DNA glycosylase K01249. (176 aa)    
Predicted Functional Partners:
xth
Exodeoxyribonuclease III; KEGG: cpr:CPR_1192 1.8e-84 xth; exodeoxyribonuclease III K01142; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.921
EFB76396.1
Putative A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
    
 0.873
EFB75467.1
HAD hydrolase, family IIB; KEGG: eci:UTI89_C4247 5.4e-12 yidA; hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB77639.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: lsl:LSL_0888 2.1e-42 arsC; arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
      0.710
EFB75754.1
Hypothetical protein; KEGG: ctc:CTC01166 6.4e-14 pyruvate formate-lyase 1 activating enzyme K04070; Psort location: Cytoplasmic, score: 8.96.
      0.692
EFB75465.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.605
EFB75468.1
Hypothetical protein.
       0.552
EFB75464.1
Toxic anion resistance protein TelA; Belongs to the TelA family.
       0.538
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
  
 
  0.529
EFB75463.1
Hypothetical protein.
       0.467
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.