STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75509.1Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_2604 3.7e-47 oxidoreductase; Psort location: Cytoplasmic, score: 8.96. (330 aa)    
Predicted Functional Partners:
EFB76839.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 2.2e-29 serine/threonine protein kinase with TPR repeats K00908.
  
  0.856
EFB75175.1
Nucleotide sugar dehydrogenase; KEGG: bth:BT0602 7.5e-182 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.96; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.835
EFB75254.1
GroES-like protein; KEGG: bsu:BG13207 1.0e-74 yjmD; similar to alcohol dehydrogenase K00100; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.811
EFB77421.1
Oxidoreductase NAD-binding domain protein; KEGG: rde:RD1_0005 6.5e-25 vanB; vanillate O-demethylase oxidoreductase, putative K00492; Psort location: Cytoplasmic, score: 8.96.
    
  0.804
EFB75774.1
GHMP kinase, N-terminal domain protein; KEGG: dde:Dde_3653 1.5e-71 galactokinase K00849; Psort location: Cytoplasmic, score: 8.96; Belongs to the GHMP kinase family.
 
 0.775
EFB75293.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: bce:BC1285 7.6e-118 aldehyde dehydrogenase K00128; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.775
EFB74558.1
AP endonuclease, family 2; KEGG: csa:Csal_0292 3.5e-08 4-hydroxyphenylpyruvate dioxygenase K00457; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.727
EFB74347.1
KEGG: hma:rrnAC0265 3.3e-21 apl; AP-endonuclease/AP-lyase K01151:K01741; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.727
EFB77480.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: ava:Ava_0899 3.0e-75 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K00811; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.679
wecE
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase; KEGG: eci:UTI89_C4347 1.5e-135 rffA, rff, fcnA, wecE, G349, yifI; TDP-4-oxo-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.671
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.