STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75594.1KEGG: sth:STH1782 3.3e-117 sugar ABC transportor ATP-binding protein K05816; Psort location: Cytoplasmic, score: 9.12; Belongs to the ABC transporter superfamily. (370 aa)    
Predicted Functional Partners:
EFB75018.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.996
EFB75020.1
ABC transporter, solute-binding protein.
  
 0.989
EFB75349.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.976
EFB74358.1
KEGG: cyb:CYB_0398 1.3e-08 modB; molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
EFB74949.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.951
EFB74552.1
KEGG: ava:Ava_0243 0.00066 molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.950
EFB75971.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.944
EFB75224.1
KEGG: cya:CYA_1846 2.1e-05 modB; molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.942
EFB74950.1
KEGG: cya:CYA_1846 0.0048 modB; molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.942
EFB75350.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.938
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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