STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75381.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (780 aa)    
Predicted Functional Partners:
EFB75538.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.717
EFB75380.1
Hypothetical protein.
       0.701
EFB74904.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.684
EFB76144.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.675
EFB76086.1
SpoIID/LytB domain protein; KEGG: cal:orf19.575 0.00020 HYR5; similar to HYR1 K01186; Belongs to the CinA family.
  
     0.661
EFB77335.1
Acyltransferase; KEGG: azo:azo2239 3.5e-05 gumF; putative acetyltransferase K00680; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.659
EFB75480.1
Sodium/calcium exchanger protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.659
EFB76769.1
Hypothetical protein.
  
     0.642
EFB76939.1
Hypothetical protein.
  
     0.627
EFB76663.1
Hypothetical protein; KEGG: spj:MGAS2096_Spy0673 1.5e-19 rgpFc; alpha-L-Rha alpha-1,2-L-rhamnosyltransferase / alpha-L-Rha alpha-1,3-L-rhamnosyltransferase K00754.
 
     0.615
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.