STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (359 aa)    
Predicted Functional Partners:
EFB75256.1
KEGG: mta:Moth_0429 4.1e-142 mannitol dehydrogenase K00040; Psort location: Cytoplasmic, score: 8.96.
 
 0.989
EFB74281.1
KEGG: mta:Moth_0429 3.5e-161 mannitol dehydrogenase K00040.
 
 0.975
uxaC
Glucuronate isomerase; KEGG: bcl:ABC0995 4.0e-128 uxaC; uronate isomerase K01812.
 
  
 0.945
EFB76936.1
Kinase, PfkB family; KEGG: mta:Moth_0419 1.1e-109 pfkB; PfkB K00874; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.911
rpiB
KEGG: tte:TTE0146 9.3e-42 rpiB; ribose 5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.811
rpiB-2
Ribose-5-phosphate isomerase B; KEGG: cno:NT01CX_0543 5.7e-42 rpiB; ribose 5-phosphate isomerase B K01806; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.811
EFB75249.1
Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 6.4e-06 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.790
EFB75254.1
GroES-like protein; KEGG: bsu:BG13207 1.0e-74 yjmD; similar to alcohol dehydrogenase K00100; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.751
EFB75253.1
TRAP transporter, DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.575
EFB75252.1
TRAP transporter, DctQ-like membrane protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.571
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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