STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75275.1Hypothetical protein. (39 aa)    
Predicted Functional Partners:
EFB75274.1
TrkA N-terminal domain protein.
       0.618
EFB75276.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cpf:CPF_1213 5.5e-87 kdpD; sensor histidine kinase KdpD; Psort location: CytoplasmicMembrane, score: 10.00.
       0.590
EFB75277.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C0698 2.8e-49 kdpE; transcriptional regulatory protein KdpE K07667; Psort location: Cytoplasmic, score: 9.97.
       0.590
EFB75273.1
KEGG: shn:Shewana3_0031 2.1e-06 potassium uptake protein, TrkH family K00961; Psort location: CytoplasmicMembrane, score: 10.00.
       0.576
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.