STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75183.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (397 aa)    
Predicted Functional Partners:
EFB75184.1
Chain length determinant protein; KEGG: rha:RHA1_ro05735 8.3e-22 possible protein-tyrosine kinase, C-terminal K08252.
  
  
 0.947
EFB75181.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: mta:Moth_0669 1.1e-43 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.858
EFB76969.1
KEGG: sus:Acid_7288 2.8e-56 undecaprenyl-phosphate galactose phosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.810
EFB75182.1
Glycosyltransferase, group 1 family protein; KEGG: sat:SYN_02685 3.6e-33 glycosyltransferase K00754.
  
    0.784
EFB75176.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: mta:Moth_0669 1.0e-49 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.646
EFB77033.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: san:gbs1243 1.2e-71 cpsE; similar to glucose-1-phosphate transferase K01005; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.562
EFB76413.1
Bacterial sugar transferase; KEGG: reu:Reut_B5365 4.1e-32 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.562
EFB75128.1
Hypothetical protein.
       0.524
EFB75129.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.462
EFB75130.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.462
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.