STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75151.1Hypothetical protein; KEGG: gox:GOX2568 1.6e-30 type I restriction-modification enzyme S subunit K01154; Psort location: Cytoplasmic, score: 8.96. (283 aa)    
Predicted Functional Partners:
EFB75154.1
Type I restriction enzyme HsdR protein N-terminal domain protein; KEGG: bli:BL02388 5.7e-44 hypothetical type I site-specific deoxyribonuclease HsdR K01153; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.963
hsdM
KEGG: bli:BL02384 1.3e-191 hypothetical type I restriction-modification system M subunit K03427.
 
 
 0.951
hsdR-3
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.938
EFB75110.1
Hypothetical protein; KEGG: fnu:FN0946 3.5e-19 zinc metalloprotease; Psort location: Cytoplasmic, score: 8.96.
 
    0.874
EFB74635.1
N-6 DNA Methylase; KEGG: chu:CHU_1468 5.5e-06 dpn; possible adenine-specific DNA methylase K00599; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.798
EFB74315.1
DEAD/DEAH box helicase; KEGG: chu:CHU_1468 3.5e-09 dpn; possible adenine-specific DNA methylase K00599.
  
 
 0.798
EFB77094.1
KEGG: par:Psyc_0877 2.8e-159 hsdM-1; putative type I restriction-modification system, M subunit K03427.
  
 
 0.793
EFB76234.1
KEGG: sha:SH0064 5.9e-166 hsdM; type I restriction-modification system DNA methylase K03427; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.793
EFB75146.1
Hypothetical protein; KEGG: bxe:Bxe_A0223 0.00025 putative HsdS protein K01152.
  
     0.773
EFB75152.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16.
       0.773
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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