STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75152.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.16. (219 aa)    
Predicted Functional Partners:
EFB75151.1
Hypothetical protein; KEGG: gox:GOX2568 1.6e-30 type I restriction-modification enzyme S subunit K01154; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB75153.1
Hypothetical protein.
       0.773
EFB75154.1
Type I restriction enzyme HsdR protein N-terminal domain protein; KEGG: bli:BL02388 5.7e-44 hypothetical type I site-specific deoxyribonuclease HsdR K01153; Psort location: Cytoplasmic, score: 8.96.
       0.686
EFB75150.1
Hypothetical protein.
       0.501
hsdR-3
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.471
EFB75110.1
Hypothetical protein; KEGG: fnu:FN0946 3.5e-19 zinc metalloprotease; Psort location: Cytoplasmic, score: 8.96.
       0.471
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.