STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75106.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (141 aa)    
Predicted Functional Partners:
EFB75105.1
Hypothetical protein; KEGG: dra:DR0159 6.4e-07 uridine kinase K00876; Psort location: Cytoplasmic, score: 8.96.
       0.794
EFB75104.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.585
EFB76090.1
4Fe-4S binding domain protein; KEGG: mma:MM3156 2.1e-35 oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
     0.557
EFB75587.1
4Fe-4S binding domain protein; KEGG: mma:MM3264 1.3e-08 coenzyme F420 hydrogenase beta subunit K00439; Psort location: Cytoplasmic, score: 8.96.
  
     0.510
EFB75544.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.478
EFB75107.1
Hypothetical protein.
       0.436
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.