STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75061.1KEGG: lin:lin0841 1.4e-86 similar to amino acid ABC transporter, ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88. (248 aa)    
Predicted Functional Partners:
EFB75526.1
KEGG: sma:SAV6546 2.5e-25 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EFB75062.1
ABC transporter, permease protein; KEGG: atc:AGR_L_2810 1.7e-27 polar amino acid transport system permease proetin / polar amino acid transport system ATP-binding proetin K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EFB75059.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 3.8e-22 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.998
EFB76987.1
KEGG: sma:SAV6546 3.2e-23 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.996
EFB75060.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.9e-24 fliY; cystine-binding periplasmic protein precursor K02030:K02424; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
 
 0.993
EFB75063.1
KEGG: bur:Bcep18194_A6491 6.5e-18 ABC amino acid transporter, periplasmic ligand binding protein K02030; Psort location: Periplasmic, score: 9.44.
 0.949
EFB75058.1
KEGG: ppu:PP_0225 3.6e-63 cysteine ABC transporter, ATP-binding protein, putative K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
 
0.946
EFB75527.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 1.4e-29 fliY; cystine-binding periplasmic protein precursor K02030:K02424; Psort location: Periplasmic, score: 10.00; Belongs to the bacterial solute-binding protein 3 family.
 0.920
EFB74791.1
KEGG: rha:RHA1_ro09047 1.2e-06 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.904
EFB77555.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 3.3e-46 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.900
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.