STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB75063.1KEGG: bur:Bcep18194_A6491 6.5e-18 ABC amino acid transporter, periplasmic ligand binding protein K02030; Psort location: Periplasmic, score: 9.44. (278 aa)    
Predicted Functional Partners:
EFB75526.1
KEGG: sma:SAV6546 2.5e-25 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.998
EFB76987.1
KEGG: sma:SAV6546 3.2e-23 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 0.997
EFB75062.1
ABC transporter, permease protein; KEGG: atc:AGR_L_2810 1.7e-27 polar amino acid transport system permease proetin / polar amino acid transport system ATP-binding proetin K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.994
EFB75059.1
ABC transporter, permease protein; KEGG: aci:ACIAD3488 3.8e-22 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane) K02028:K02029; Psort location: CytoplasmicMembrane, score: 10.00.
 0.988
EFB75061.1
KEGG: lin:lin0841 1.4e-86 similar to amino acid ABC transporter, ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 0.949
EFB75058.1
KEGG: ppu:PP_0225 3.6e-63 cysteine ABC transporter, ATP-binding protein, putative K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 0.908
EFB75525.1
ABC transporter, ATP-binding protein; KEGG: cje:Cj0902 2.0e-78 glnQ; glutamine transport system ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 7.88.
 0.901
EFB76986.1
KEGG: efa:EF0246 3.2e-80 amino acid ABC transporter, ATP-binding protein K02028; Psort location: Cytoplasmic, score: 9.12.
 0.872
EFB76951.1
Chorismate mutase; KEGG: mxa:MXAN_3221 2.3e-45 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.26.
    
 0.844
EFB77421.1
Oxidoreductase NAD-binding domain protein; KEGG: rde:RD1_0005 6.5e-25 vanB; vanillate O-demethylase oxidoreductase, putative K00492; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.804
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.