STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74794.1Hypothetical protein. (51 aa)    
Predicted Functional Partners:
EFB74793.1
Hypothetical protein.
       0.773
EFB74792.1
KEGG: rha:RHA1_ro09047 9.4e-49 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
       0.560
EFB74791.1
KEGG: rha:RHA1_ro09047 1.2e-06 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
       0.542
EFB74789.1
ABC transporter, ATP-binding protein; KEGG: reh:H16_B1124 1.2e-87 ABC-type transporter; Psort location: Cytoplasmic, score: 9.12.
       0.504
EFB74790.1
KEGG: cch:Cag_1883 1.4e-84 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; Belongs to the ABC transporter superfamily.
       0.504
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.