STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74603.1Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 10.00. (480 aa)    
Predicted Functional Partners:
EFB75242.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1304 1.7e-24 putative protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 9.97.
  
 0.873
EFB74602.1
Hypothetical protein.
       0.723
EFB76789.1
Metallo-beta-lactamase domain protein; KEGG: nwi:Nwi_0113 2.7e-26 beta-lactamase-like K01069.
    
 
 0.638
EFB75411.1
Metallo-beta-lactamase domain protein; KEGG: rso:RSc0258 8.3e-07 RS00693; putative beta lactamase protein K01467; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.638
EFB74960.1
Metallo-beta-lactamase domain protein; KEGG: hwa:HQ3137A 1.9e-07 hydrolase (probable hydroxyacylglutathione hydrolase) K01069; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.638
EFB74485.1
Metallo-beta-lactamase domain protein; KEGG: cvi:CV1254 1.0e-08 gloB; hydroxyacylglutathione hydrolase K01069; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.638
EFB75445.1
DEAD/DEAH box helicase; KEGG: hch:HCH_04705 1.0e-65 superfamily II DNA and RNA helicase K01529; Psort location: Cytoplasmic, score: 8.96; Belongs to the DEAD box helicase family.
     
 0.624
EFB74604.1
Hypothetical protein.
       0.542
EFB74605.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.444
EFB77031.1
Transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.401
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.