STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74635.1N-6 DNA Methylase; KEGG: chu:CHU_1468 5.5e-06 dpn; possible adenine-specific DNA methylase K00599; Psort location: Cytoplasmic, score: 8.96. (2002 aa)    
Predicted Functional Partners:
EFB77089.1
Hypothetical protein; KEGG: stt:t4574 2.7e-19 hsdS; subunit S of type I restriction-modification system K01154.
  
 
 0.798
EFB77092.1
Hypothetical protein; KEGG: bme:BMEII0450 6.1e-09 type I restriction-modification system specificity subunit K01154.
  
 
 0.798
EFB77093.1
Hypothetical protein; KEGG: par:Psyc_0878 1.8e-29 probable type I restriction modification system methylase K01154.
  
 
 0.798
EFB76233.1
Type I restriction modification DNA specificity domain protein; KEGG: pmu:PM1538 1.1e-45 hsdA; type I site-specific deoxyribonuclease, putative K01154.
  
 
 0.798
EFB75146.1
Hypothetical protein; KEGG: bxe:Bxe_A0223 0.00025 putative HsdS protein K01152.
  
 
 0.798
EFB75151.1
Hypothetical protein; KEGG: gox:GOX2568 1.6e-30 type I restriction-modification enzyme S subunit K01154; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.798
hsdR
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.783
hsdR-2
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.783
EFB75154.1
Type I restriction enzyme HsdR protein N-terminal domain protein; KEGG: bli:BL02388 5.7e-44 hypothetical type I site-specific deoxyribonuclease HsdR K01153; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.783
hsdR-3
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.783
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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