STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74476.1KEGG: efa:EF1922 5.2e-05 transcriptional regulator, LacI family/carbohydrate kinase, PfkB family protein K00852; Psort location: Cytoplasmic, score: 9.26. (341 aa)    
Predicted Functional Partners:
EFB76824.1
Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268.
    
 
 0.949
EFB77562.1
Phosphotransferase system, EIIC; KEGG: lmf:LMOf2365_1056 6.1e-93 PTS system, beta-glucoside-specific, IIABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.839
EFB75520.1
Phosphotransferase system, EIIC; KEGG: bha:BH0595 1.8e-109 bglP; PTS system, beta-glucoside-specific enzyme II, ABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.839
EFB74847.1
Phosphotransferase system, EIIB; KEGG: lpl:lp_0905 1.7e-74 pts12BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.839
EFB74509.1
Phosphotransferase system, EIIC; KEGG: lwe:lwe0269 1.5e-91 PTS system, beta-glucoside-specific IIABC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.839
EFB74407.1
PTS system, glucose-like IIB component; KEGG: gka:GK0991 1.0e-153 PTS system, glucose-specific enzyme II, A component K02763:K02764:K02765; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.839
rpiB
KEGG: tte:TTE0146 9.3e-42 rpiB; ribose 5-phosphate isomerase B K01808; Psort location: Cytoplasmic, score: 8.96.
    
 0.794
rpiB-2
Ribose-5-phosphate isomerase B; KEGG: cno:NT01CX_0543 5.7e-42 rpiB; ribose 5-phosphate isomerase B K01806; Psort location: Cytoplasmic, score: 8.96.
    
 0.794
pyk
Pyruvate kinase; KEGG: tte:TTE1815 6.5e-160 pykF; pyruvate kinase K00873; Belongs to the pyruvate kinase family.
    
 
 0.708
EFB76435.1
Phosphocarrier, HPr family; KEGG: bci:BCI_0069 1.4e-13 ptsH; phosphocarrier protein HPr K00890; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.690
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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