STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74371.1Hypothetical protein; Overlaps another CDS with the same product name. (184 aa)    
Predicted Functional Partners:
EFB74983.1
Hypothetical protein.
 
     0.976
EFB74910.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.976
EFB74331.1
Hypothetical protein.
 
     0.976
EFB74372.1
Hypothetical protein.
 
   
 0.832
EFB74370.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name.
 
    
0.809
xylB-2
Xylulokinase; KEGG: mta:Moth_2025 9.6e-111 xylulokinase K00854; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.774
EFB74373.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.704
EFB74374.1
Hypothetical protein.
       0.704
EFB74379.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    
0.599
EFB74376.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_1706 7.5e-72 xylose transport system permease protein XylH; Psort location: CytoplasmicMembrane, score: 10.00.
       0.588
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.