STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFB74296.1Hypothetical protein. (133 aa)    
Predicted Functional Partners:
EFB74297.1
Exonuclease; KEGG: yps:YPTB3136 7.5e-13 putative conserved bacteriophage protein K00961; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFB74298.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.689
EFB74299.1
CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: fal:FRAAL2247 2.8e-40 chromosome partitioning protein (partial match) K08253.
       0.670
EFB74300.1
ParB-like protein; KEGG: pub:SAR11_0354 6.5e-11 parB; chromosome partitioning protein K03497; Belongs to the ParB family.
       0.670
EFB74294.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.535
EFB74295.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.535
EFB74293.1
Site-specific recombinase, phage integrase family; Psort location: Cytoplasmic, score: 8.96.
       0.515
EFB74301.1
Hypothetical protein.
       0.485
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.