STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97561.1TIGR02687 family protein; Psort location: Cytoplasmic, score: 7.50. (857 aa)    
Predicted Functional Partners:
ERJ97560.1
Hypothetical protein; KEGG: tep:TepRe1_0535 2.1e-176 hypothetical protein; K01338 ATP-dependent Lon protease; Psort location: Cytoplasmic, score: 7.50.
 
     0.952
ERJ97562.1
Hypothetical protein; KEGG: ljf:FI9785_1029 2.2e-67 putative Type II restriction enzyme, methylase subunits; Psort location: Cytoplasmic, score: 7.50.
 
     0.950
ERJ97565.1
Hypothetical protein; KEGG: aml:100474469 0.00099 rho-associated protein kinase 1-like; K04514 Rho-associated, coiled-coil containing protein kinase; Psort location: CytoplasmicMembrane, score: 8.16.
 
    0.948
ERJ97566.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.944
ERJ97567.1
Putative inner membrane protein DUF1819; Psort location: Cytoplasmic, score: 7.50.
 
     0.944
ERJ97564.1
Hypothetical protein; KEGG: mma:MM_0156 6.7e-139 type IIS restriction enzyme K01155; Psort location: Cytoplasmic, score: 7.50.
 
     0.943
htpG
Putative chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.901
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
   0.853
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
   0.852
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.852
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.