STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ97538.1KEGG: bug:BC1001_0160 0.00010 beta-lactamase domain-containing protein; K01467 beta-lactamase; Psort location: Cytoplasmic, score: 7.50. (254 aa)    
Predicted Functional Partners:
ERJ97539.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.793
ERJ97540.1
Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 7.8e-74 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 8.78.
       0.671
ERJ97541.1
Potassium uptake protein, TrkH family; KEGG: ssr:SALIVB_0283 5.9e-108 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.645
ERJ97535.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.0e-116 h16_A1582; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
 
  
 0.544
ERJ97537.1
Putative radical SAM protein YgiQ; KEGG: dat:HRM2_33330 2.3e-129 putative Fe-S oxidoreductase family protein; Psort location: Cytoplasmic, score: 7.50.
       0.541
ERJ97536.1
Hypothetical protein.
       0.464
ERJ97542.1
Hypothetical protein.
       0.424
Your Current Organism:
Ruminococcus callidus
NCBI taxonomy Id: 411473
Other names: R. callidus ATCC 27760, Ruminococcus callidus ATCC 27760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.